SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB17307

Signal sequence   MPTTPLLLAALAALAALAVA

Length  20

Organism  Rattus norvegicus (Rat)

UniProt ID  O54858,

Motif  1..20



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB17307.cif

Structure  SPKB17307.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  1892.37084

Aliphatic index  171.5

Isoelectric point  6.099999998

Charge (pH=7)   -0.002015701

Topological polar surface area  639.1

Aromaticity  0

Average rotatable bonds  2.75

Number of hydrogen bond donors  21

Number of hydrogen bond acceptors  24

X logP energy  -2.7716

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.