SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB17204

Signal sequence   MSLYHSLSIFLLLSLCHGSYS

Length  21

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  O22940,

Motif  1..21



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB17204.cif

Structure  SPKB17204.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2371.79434

Aliphatic index  130

Isoelectric point  7.516815868

Charge (pH=7)   0.116126937

Topological polar surface area  864.52

Aromaticity  0.142857143

Average rotatable bonds  3.571428571

Number of hydrogen bond donors  33

Number of hydrogen bond acceptors  34

X logP energy  -6.244

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.