SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB17004

Signal sequence   MVKLFCAIVGAAGSAFP

Length  17

Organism  Phytophthora sojae (strain P6497) (Soybean stem and root rot agent) (Phytophthora megasperma f. sp. glycines)

UniProt ID  G4YRT1,

Motif  1..17



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB17004.cif

Structure  SPKB17004.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  1682.07184

Aliphatic index  103.5294118

Isoelectric point  8.545189979

Charge (pH=7)   0.93571455

Topological polar surface area  566.38

Aromaticity  0.117647059

Average rotatable bonds  3

Number of hydrogen bond donors  20

Number of hydrogen bond acceptors  22

X logP energy  -3.3025

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.