SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB16952

Signal sequence   MGKKEMIMVKGIPKIMLLISITFLLLSLINC

Length  31

Organism  Human cytomegalovirus (strain Merlin) (HHV-5) (Human herpesvirus 5)

UniProt ID  F5HGP1,

Motif  1..31



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Virion

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB16952.cif

Structure  SPKB16952.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3492.54414

Aliphatic index  160.3225806

Isoelectric point  10.3412336

Charge (pH=7)   2.936604571

Topological polar surface area  1172.69

Aromaticity  0.032258065

Average rotatable bonds  4

Number of hydrogen bond donors  41

Number of hydrogen bond acceptors  46

X logP energy  -2.273

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.