SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB16949

Signal sequence   MESRIWCLVVCVNLCIVCLGAAVS

Length  24

Organism  Human cytomegalovirus (strain Merlin) (HHV-5) (Human herpesvirus 5)

UniProt ID  F5HB53,

Motif  1..24



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Virion

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  5C6T,

Predicted Structure ID  SPKB16949.cif

Structure  SPKB16949.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2582.20894

Aliphatic index  150

Isoelectric point  6.017807846

Charge (pH=7)   -0.248142753

Topological polar surface area  931.16

Aromaticity  0.041666667

Average rotatable bonds  3.416666667

Number of hydrogen bond donors  37

Number of hydrogen bond acceptors  35

X logP energy  -6.08523

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.