SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB16930

Signal sequence   MSYMPTSCLVLFFLLFLFHPLPWALS

Length  26

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  F4HQ23,

Motif  1..26



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB16930.cif

Structure  SPKB16930.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3074.79294

Aliphatic index  120

Isoelectric point  7.355498302

Charge (pH=7)   0.02606826

Topological polar surface area  910.07

Aromaticity  0.230769231

Average rotatable bonds  3.384615385

Number of hydrogen bond donors  32

Number of hydrogen bond acceptors  36

X logP energy  1.4381

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.