SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB16860

Signal sequence   MTRKQTPMTLALCALGLFAASAASALA

Length  27

Organism  Thiomonas intermedia (strain K12) (Thiobacillus intermedius)

UniProt ID  D5WYQ5,

Motif  1..27



Activity Information


Pathway  NA

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  NA



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB16860.cif

Structure  SPKB16860.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2709.27584

Aliphatic index  101.8518519

Isoelectric point  9.833242293

Charge (pH=7)   1.935711238

Topological polar surface area  1043.29

Aromaticity  0.037037037

Average rotatable bonds  3.222222222

Number of hydrogen bond donors  38

Number of hydrogen bond acceptors  39

X logP energy  -11.00613

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.