SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB16852

Signal sequence   MDRRQFLRTVGASALAVSTAAVVGSRPATA

Length  30

Organism  Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) (Halobacterium volcanii)

UniProt ID  D4H031,

Motif  1..30



Activity Information


Pathway  Tat

Natural/Artificial  Natural

Subcellular location  Cell membrane

Secretion efficiency  NA

Type  Tat/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB16852.cif

Structure  SPKB16852.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3060.52494

Aliphatic index  88

Isoelectric point  12.50005466

Charge (pH=7)   2.998417538

Topological polar surface area  1347.8

Aromaticity  0.033333333

Average rotatable bonds  3.266666667

Number of hydrogen bond donors  50

Number of hydrogen bond acceptors  44

X logP energy  -18.00962

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.