SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB16772

Signal sequence   MKLSRRHFMKANAVAAAAAVAGITIPIAVRA

Length  31

Organism  Pectobacterium carotovorum subsp. carotovorum (strain PC1)

UniProt ID  C6DK59,

Motif  1..31



Activity Information


Pathway  Tat

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  Tat/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB16772.cif

Structure  SPKB16772.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3206.90794

Aliphatic index  110.6451613

Isoelectric point  12.81363662

Charge (pH=7)   5.088293389

Topological polar surface area  1277.5

Aromaticity  0.032258065

Average rotatable bonds  3.387096774

Number of hydrogen bond donors  46

Number of hydrogen bond acceptors  43

X logP energy  -11.55769

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.