SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB16724

Signal sequence   MSLNRFLFTSFSFFLFFIVHFA

Length  22

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  C0LGG7,

Motif  1..22



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB16724.cif

Structure  SPKB16724.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2719.24174

Aliphatic index  88.63636364

Isoelectric point  10.5517587

Charge (pH=7)   1.088890079

Topological polar surface area  889.01

Aromaticity  0.363636364

Average rotatable bonds  3.772727273

Number of hydrogen bond donors  32

Number of hydrogen bond acceptors  31

X logP energy  -1.40373

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.