SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB16712

Signal sequence   MSSSSSSSRCCAAGVFLVPSLLLLPLLLSLIHTAHG

Length  36

Organism  Danio rerio (Zebrafish) (Brachydanio rerio)

UniProt ID  C0HM54,

Motif  1..36



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB16712.cif

Structure  SPKB16712.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3669.37344

Aliphatic index  132.7777778

Isoelectric point  8.253842539

Charge (pH=7)   1.055849738

Topological polar surface area  1385.8

Aromaticity  0.027777778

Average rotatable bonds  3.222222222

Number of hydrogen bond donors  52

Number of hydrogen bond acceptors  53

X logP energy  -15.16403

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.