SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB16588

Signal sequence   MKKWSYAKLMTSALLLVFLSIILLAFHGGSRG

Length  32

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  B3H5Q2,

Motif  1..32



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB16588.cif

Structure  SPKB16588.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3553.37094

Aliphatic index  128.125

Isoelectric point  11.13194157

Charge (pH=7)   4.087154563

Topological polar surface area  1271.23

Aromaticity  0.125

Average rotatable bonds  3.71875

Number of hydrogen bond donors  47

Number of hydrogen bond acceptors  46

X logP energy  -5.91813

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.