SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB16567

Signal sequence   MKMKYFHHPSGLLPRLLLLLLLTMGAVA

Length  28

Organism  Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / CIP 103683 / JCM 12257 / NCTC 11834 / 2561)

UniProt ID  B2RH57,

Motif  1..28



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Cell membrane

Secretion efficiency  NA

Type  Sec/SPII



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB16567.cif

Structure  SPKB16567.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3165.00884

Aliphatic index  142.8571429

Isoelectric point  10.90186336

Charge (pH=7)   3.178358688

Topological polar surface area  1063.43

Aromaticity  0.071428571

Average rotatable bonds  3.678571429

Number of hydrogen bond donors  37

Number of hydrogen bond acceptors  40

X logP energy  -1.84993

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.