SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB16549

Signal sequence   MQSNRRDFLKAQALAASAAAAGIPIVVEA

Length  29

Organism  Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix discophora (strain SP-6))

UniProt ID  B1Y6A6,

Motif  1..29



Activity Information


Pathway  Tat

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  Tat/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB16549.cif

Structure  SPKB16549.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2970.43984

Aliphatic index  104.8275862

Isoelectric point  9.690161255

Charge (pH=7)   0.99990425

Topological polar surface area  1263.48

Aromaticity  0.034482759

Average rotatable bonds  3.379310345

Number of hydrogen bond donors  43

Number of hydrogen bond acceptors  41

X logP energy  -13.83236

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.