SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB16388

Signal sequence   ANTKNREPKVSSVFLCFSIFYVTVLLNCNHVYG

Length  33

Organism  Medicago sativa subsp. varia (Alfalfa) (Medicago varia)

UniProt ID  A5JTQ2,

Motif  <1..33



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB16388.cif

Structure  SPKB16388.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3764.37494

Aliphatic index  94.24242424

Isoelectric point  8.769722353

Charge (pH=7)   1.964424874

Topological polar surface area  1479.62

Aromaticity  0.151515152

Average rotatable bonds  3.606060606

Number of hydrogen bond donors  53

Number of hydrogen bond acceptors  52

X logP energy  -13.38993

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.