SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB16379

Signal sequence   MKMTRRAFVKANAAASAAAVAGITLPASA

Length  29

Organism  Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)

UniProt ID  A5EZX9,

Motif  1..29



Activity Information


Pathway  Tat

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  Tat/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB16379.cif

Structure  SPKB16379.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2847.39004

Aliphatic index  84.82758621

Isoelectric point  12.53174703

Charge (pH=7)   3.997387609

Topological polar surface area  1169.18

Aromaticity  0.034482759

Average rotatable bonds  3.172413793

Number of hydrogen bond donors  42

Number of hydrogen bond acceptors  41

X logP energy  -14.11156

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.