SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB16378

Signal sequence   MTDMKIDRRQMLKLEAAAIAAAAAGMPSTSLA

Length  32

Organism  Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182)

UniProt ID  A5ED21,

Motif  1..32



Activity Information


Pathway  Tat

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  Tat/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB16378.cif

Structure  SPKB16378.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3334.97364

Aliphatic index  89.0625

Isoelectric point  9.532416112

Charge (pH=7)   1.0000557

Topological polar surface area  1368.38

Aromaticity  0

Average rotatable bonds  3.5625

Number of hydrogen bond donors  48

Number of hydrogen bond acceptors  49

X logP energy  -14.40286

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.