SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB16368

Signal sequence   MKLSRREFAKANAAAIAAAAAGLPLASTA

Length  29

Organism  Ectopseudomonas mendocina (strain ymp) (Pseudomonas mendocina)

UniProt ID  A4XWM0,

Motif  1..29



Activity Information


Pathway  Tat

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  Tat/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB16368.cif

Structure  SPKB16368.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2843.34024

Aliphatic index  95.17241379

Isoelectric point  11.65088967

Charge (pH=7)   2.999162732

Topological polar surface area  1186.25

Aromaticity  0.034482759

Average rotatable bonds  3.206896552

Number of hydrogen bond donors  42

Number of hydrogen bond acceptors  40

X logP energy  -13.58056

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.