SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB16337

Signal sequence   MSLIPKPISKVSTFTFILLILLSFTIIIA

Length  29

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  A3KPF5,

Motif  1..29



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB16337.cif

Structure  SPKB16337.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3221.07154

Aliphatic index  174.8275862

Isoelectric point  10.80537956

Charge (pH=7)   1.997394232

Topological polar surface area  1054.19

Aromaticity  0.103448276

Average rotatable bonds  3.586206897

Number of hydrogen bond donors  37

Number of hydrogen bond acceptors  40

X logP energy  -1.935

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.