SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB16330

Signal sequence   MSIKKLILAASILTTLALTG

Length  20

Organism  Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) (Clostridium thermocellum)

UniProt ID  A3DHD2,

Motif  1..20



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Cell membrane

Secretion efficiency  NA

Type  Sec/SPII



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB16330.cif

Structure  SPKB16330.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2058.59124

Aliphatic index  171

Isoelectric point  10.80537956

Charge (pH=7)   1.997394232

Topological polar surface area  769.41

Aromaticity  0

Average rotatable bonds  3.55

Number of hydrogen bond donors  28

Number of hydrogen bond acceptors  29

X logP energy  -5.1925

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.