SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB16237

Signal sequence   MAAAAFFLLVGAQHIMVSEAFA

Length  22

Organism  Porcine reproductive and respiratory syndrome virus (isolate Pig/United States/SD 01-08/2001) (PRRSV)

UniProt ID  A0MD33,

Motif  1..22



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Virion

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB16237.cif

Structure  SPKB16237.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2295.74264

Aliphatic index  111.3636364

Isoelectric point  5.363507222

Charge (pH=7)   -0.909331487

Topological polar surface area  803.72

Aromaticity  0.136363636

Average rotatable bonds  3.272727273

Number of hydrogen bond donors  27

Number of hydrogen bond acceptors  29

X logP energy  -3.8772

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.