SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB16236

Signal sequence   MQWGHCGVKSASCSWMPSLSFLSVWLILSFSLPYC

Length  35

Organism  Porcine reproductive and respiratory syndrome virus (isolate Pig/United States/SD 01-08/2001) (PRRSV)

UniProt ID  A0MD30,

Motif  1..35



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Virion

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB16236.cif

Structure  SPKB16236.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3952.69474

Aliphatic index  86.28571429

Isoelectric point  8.056199563

Charge (pH=7)   0.901823794

Topological polar surface area  1362.37

Aromaticity  0.171428571

Average rotatable bonds  3.4

Number of hydrogen bond donors  52

Number of hydrogen bond acceptors  53

X logP energy  -9.0348

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.