SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB16071

Signal sequence   MNRIFKSIWCEQTRTWVAASEHAVARGGRASSVVASAGGLEKVLKLSILGAASLIAMGVVGPFAEEAMAAN

Length  71

Organism  Burkholderia pseudomallei (strain 1026b)

UniProt ID  A0A0H3HIJ5,

Motif  1..71



Activity Information


Pathway  NA

Natural/Artificial  Natural

Subcellular location  Cell membrane

Secretion efficiency  NA

Type  NA



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB16071.cif

Structure  SPKB16071.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  7345.54424

Aliphatic index  97.74647887

Isoelectric point  9.576138676

Charge (pH=7)   2.034895941

Topological polar surface area  2975.29

Aromaticity  0.056338028

Average rotatable bonds  3.436619718

Number of hydrogen bond donors  107

Number of hydrogen bond acceptors  101

X logP energy  -30.87782

Hydropathy 



Literature Information


Title  Functional characterization of Burkholderia pseudomallei trimeric autotransporters.

DOI  10.1128/IAI.00526-13,

Publication Year  2013

PubMed ID  23716608,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.