SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB15772

Signal sequence   METQKNWQTLWRGGLMIFGMLMICKAKE

Length  28

Organism  Human immunodeficiency virus type 1 group M subtype J (isolate SE9280) (HIV-1)

UniProt ID  Q9WC60,

Motif  1..28



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Virion

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB15772.cif

Structure  SPKB15772.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3345.07514

Aliphatic index  73.21428571

Isoelectric point  9.579848747

Charge (pH=7)   1.938671416

Topological polar surface area  1264.89

Aromaticity  0.107142857

Average rotatable bonds  4.142857143

Number of hydrogen bond donors  45

Number of hydrogen bond acceptors  45

X logP energy  -7.18673

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.