SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB15213

Signal sequence   MSQTFAVILLLLIFLTHLVSS

Length  21

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q9M2S4,

Motif  1..21



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB15213.cif

Structure  SPKB15213.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2346.89684

Aliphatic index  180.952381

Isoelectric point  7.550323994

Charge (pH=7)   0.08889339

Topological polar surface area  818.24

Aromaticity  0.095238095

Average rotatable bonds  3.619047619

Number of hydrogen bond donors  29

Number of hydrogen bond acceptors  30

X logP energy  -2.9967

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.