SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB15178

Signal sequence   MLYFIFCQNLSSSSSMSNSILFLSLFLFLPFVVDS

Length  35

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q9LSL5,

Motif  1..35



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB15178.cif

Structure  SPKB15178.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3998.72204

Aliphatic index  116.8571429

Isoelectric point  3.749971056

Charge (pH=7)   -1.064394347

Topological polar surface area  1412.8

Aromaticity  0.2

Average rotatable bonds  3.628571429

Number of hydrogen bond donors  50

Number of hydrogen bond acceptors  53

X logP energy  -9.6232

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.