SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB15173

Signal sequence   MRNWEDPFTLACNTALKKNLPSCIFIIIFISVLCPVAMS

Length  39

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q9LPT1,

Motif  1..39



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB15173.cif

Structure  SPKB15173.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  4401.34214

Aliphatic index  112.5641026

Isoelectric point  8.044860904

Charge (pH=7)   0.81368838

Topological polar surface area  1577.5

Aromaticity  0.102564103

Average rotatable bonds  3.564102564

Number of hydrogen bond donors  56

Number of hydrogen bond acceptors  58

X logP energy  -9.90093

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.