SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB15154

Signal sequence   MDYMRIFSVFVVTLWIIRVDA

Length  21

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q9LJR7,

Motif  1..21



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB15154.cif

Structure  SPKB15154.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2575.12514

Aliphatic index  134.2857143

Isoelectric point  6.443163629

Charge (pH=7)   -0.001979769

Topological polar surface area  920.2

Aromaticity  0.19047619

Average rotatable bonds  3.857142857

Number of hydrogen bond donors  34

Number of hydrogen bond acceptors  31

X logP energy  -1.56446

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.