SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB14825

Signal sequence   MSVPASSFLLLCFLMNSFSPAQS

Length  23

Organism  Ictalurus punctatus (Channel catfish) (Silurus punctatus)

UniProt ID  Q9DG80,

Motif  1..23



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB14825.cif

Structure  SPKB14825.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2477.93394

Aliphatic index  89.13043478

Isoelectric point  5.922539791

Charge (pH=7)   -0.063990417

Topological polar surface area  893.5

Aromaticity  0.130434783

Average rotatable bonds  3.304347826

Number of hydrogen bond donors  31

Number of hydrogen bond acceptors  35

X logP energy  -8.7847

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.