SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB14079

Signal sequence   MARCTNLVTVFLLWALLMFSWCKA

Length  24

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q8RY29,

Motif  1..24



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB14079.cif

Structure  SPKB14079.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2818.51004

Aliphatic index  117.9166667

Isoelectric point  8.828181491

Charge (pH=7)   1.873736522

Topological polar surface area  955.9

Aromaticity  0.166666667

Average rotatable bonds  3.666666667

Number of hydrogen bond donors  37

Number of hydrogen bond acceptors  35

X logP energy  -2.52833

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.