SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB14066

Signal sequence   MSDMEKPWKEEEKREVLAGHARRQAPQAVDKGPVTGDQRISVTVVLRRQRGDELEAHVERQAALAPHARVHLEREAFAASHGASLDDFAEIRKFAEAHGLTLDRAHVAAGTAVLSGPVDAVNQAFGVELRHFDHPDGSYRSYVGDVRVPASIAPLIEAVFGLDTRPVARPHFRLRRRAEGEFEARSQSAAPTAYTPLDVAQAYQFPEGLDGQGQCIAIIELGGGYDETSLAQYFASLGVSAPQVVSVSVDGATNQPTGDPNGPDGEVELDIEVAGALAPGAKIAVYFAPNTDAGFLNAITTAVHDPTHKPSIVSISWGGPEDSWAPASIAAMNRAFLDAAALGVTVLAAAGDSGSTDGEQDGLYHVDFPAASPYVLACGGTRLVASAGRIERETVWNDGPDGGSTGGGVSRIFPLPSWQERANVPPSANPGAGSGRGVPDVAGNADPATGYEVVIDGETTVIGGTSAVAPLFAALVARINQKLGKPVGYLNPTLYQLPPEVFHDITEGNNDIANRARIYQAGPGWDPCTGLGSPIGIRLLQALLPSASQAQP

Length  100

Organism  Bacillus sp. (strain MN-32)

UniProt ID  Q8RR56,

Motif  1..NA



Activity Information


Pathway  NA

Natural/Artificial  Natural

Subcellular location  Extracellular environment

Secretion efficiency  NA

Type  NA



Structure Information


PDB ID  1GT9,

Predicted Structure ID  SPKB14066.cif

Structure  SPKB14066.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  57743.26974

Aliphatic index  82.46376812

Isoelectric point  4.70305599

Charge (pH=7)   -23.85660166

Topological polar surface area  24042.58

Aromaticity  0.065217391

Average rotatable bonds  1.811594203

Number of hydrogen bond donors  817

Number of hydrogen bond acceptors  791

X logP energy  -512.35989

Hydropathy 



Literature Information


Title  1.2 A crystal structure of the serine carboxyl proteinase pro-kumamolisin; structure of an intact pro-subtilase.

DOI  10.1016/j.str.2004.04.013,

Publication Year  2004

PubMed ID  15242607,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.