SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB13942

Signal sequence   MENCMIRNTGYFLTIFFLAFISFAVTCSG

Length  29

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q8LGN1,

Motif  1..29



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB13942.cif

Structure  SPKB13942.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3297.91034

Aliphatic index  84.13793103

Isoelectric point  6.133775205

Charge (pH=7)   -0.125043735

Topological polar surface area  1184.88

Aromaticity  0.206896552

Average rotatable bonds  3.586206897

Number of hydrogen bond donors  44

Number of hydrogen bond acceptors  44

X logP energy  -8.30473

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.