SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB13872

Signal sequence   MTARGAAGRCPSSTWMGSRLLLVCLLVSRSVA

Length  32

Organism  Rattus norvegicus (Rat)

UniProt ID  Q8JZQ0,

Motif  1..32



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB13872.cif

Structure  SPKB13872.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3351.02484

Aliphatic index  100.625

Isoelectric point  12.02344377

Charge (pH=7)   3.874021622

Topological polar surface area  1361.63

Aromaticity  0.03125

Average rotatable bonds  3.375

Number of hydrogen bond donors  54

Number of hydrogen bond acceptors  48

X logP energy  -16.02842

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.