SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB13763

Signal sequence   MRRNTDQESPIMSYYSSFFFLFLFSFLTSFRVSA

Length  34

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q8GYA4,

Motif  1..34



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB13763.cif

Structure  SPKB13763.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  4123.71304

Aliphatic index  57.35294118

Isoelectric point  9.170502619

Charge (pH=7)   0.998495144

Topological polar surface area  1583.84

Aromaticity  0.264705882

Average rotatable bonds  3.823529412

Number of hydrogen bond donors  58

Number of hydrogen bond acceptors  55

X logP energy  -13.15719

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.