SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB13605

Signal sequence   MAHVNNYLLVTLLLISIYGYMGKN

Length  24

Organism  Human immunodeficiency virus type 2 subtype B (isolate EHO) (HIV-2)

UniProt ID  Q89607,

Motif  1..24



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Virion

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB13605.cif

Structure  SPKB13605.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2741.30194

Aliphatic index  142.0833333

Isoelectric point  9.051719169

Charge (pH=7)   1.086047114

Topological polar surface area  1017.74

Aromaticity  0.125

Average rotatable bonds  3.708333333

Number of hydrogen bond donors  35

Number of hydrogen bond acceptors  37

X logP energy  -5.0887

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.