SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB13602

Signal sequence   MTRSPRRPLFAVSLVLSAMLLAGAAHA

Length  27

Organism  Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)

UniProt ID  Q88JH0,

Motif  1..27



Activity Information


Pathway  NA

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  NA



Structure Information


PDB ID  6ZCV,

Predicted Structure ID  SPKB13602.cif

Structure  SPKB13602.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2837.44064

Aliphatic index  115.9259259

Isoelectric point  12.80107132

Charge (pH=7)   3.088883456

Topological polar surface area  1097.64

Aromaticity  0.037037037

Average rotatable bonds  3.296296296

Number of hydrogen bond donors  40

Number of hydrogen bond acceptors  38

X logP energy  -9.82899

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.