SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB13600

Signal sequence   MRGRQKIAIVGAGLGGAAAATLLQQ

Length  25

Organism  Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)

UniProt ID  Q88FY2,

Motif  1..25



Activity Information


Pathway  NA

Natural/Artificial  Natural

Subcellular location  Extracellular environment

Secretion efficiency  NA

Type  NA



Structure Information


PDB ID  5EOW,

Predicted Structure ID  SPKB13600.cif

Structure  SPKB13600.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2451.91604

Aliphatic index  113.6

Isoelectric point  12.51647815

Charge (pH=7)   2.997682643

Topological polar surface area  1061.04

Aromaticity  0

Average rotatable bonds  3.4

Number of hydrogen bond donors  37

Number of hydrogen bond acceptors  34

X logP energy  -12.21766

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.