SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB13599

Signal sequence   MNSHASNGRSRNWPHALLESALLTSALLMASSVALA

Length  36

Organism  Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000)

UniProt ID  Q887Q3,

Motif  1..36



Activity Information


Pathway  NA

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  NA



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB13599.cif

Structure  SPKB13599.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3778.31884

Aliphatic index  103.3333333

Isoelectric point  10.40128847

Charge (pH=7)   1.181570981

Topological polar surface area  1598.39

Aromaticity  0.027777778

Average rotatable bonds  3.388888889

Number of hydrogen bond donors  57

Number of hydrogen bond acceptors  55

X logP energy  -19.87186

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.