SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB13513

Signal sequence   MQPQRDLRGLWLLLLSLFLLLFEVARA

Length  27

Organism  Rattus norvegicus (Rat)

UniProt ID  Q80ZD7,

Motif  1..27



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB13513.cif

Structure  SPKB13513.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3212.93324

Aliphatic index  162.5925926

Isoelectric point  10.30863985

Charge (pH=7)   1.000195972

Topological polar surface area  1193.63

Aromaticity  0.111111111

Average rotatable bonds  3.925925926

Number of hydrogen bond donors  42

Number of hydrogen bond acceptors  37

X logP energy  -3.08739

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.