SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB13405

Signal sequence   MGPQRPALRAPLLLLFLLLFLDTSVWA

Length  27

Organism  Rattus norvegicus (Rat)

UniProt ID  Q7TMA5,

Motif  1..27



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB13405.cif

Structure  SPKB13405.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3052.75744

Aliphatic index  151.8518519

Isoelectric point  10.39776887

Charge (pH=7)   0.998424161

Topological polar surface area  1053.99

Aromaticity  0.111111111

Average rotatable bonds  3.444444444

Number of hydrogen bond donors  36

Number of hydrogen bond acceptors  35

X logP energy  -2.11396

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.