SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB13361

Signal sequence   MSTPRAAASLAKKAALVALAVLAAALATAARA

Length  32

Organism  Oryza sativa subsp. japonica (Rice)

UniProt ID  Q7DNA1,

Motif  1..32



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB13361.cif

Structure  SPKB13361.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3021.65854

Aliphatic index  125.9375

Isoelectric point  12.53174703

Charge (pH=7)   3.997387609

Topological polar surface area  1213.39

Aromaticity  0

Average rotatable bonds  3.03125

Number of hydrogen bond donors  44

Number of hydrogen bond acceptors  42

X logP energy  -12.94186

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.