SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB13356

Signal sequence   MTVTMKVMKKNNRKSWSLYIAMALLIPCLSYSK

Length  33

Organism  Human immunodeficiency virus type 1 group O (isolate MVP5180) (HIV-1)

UniProt ID  Q79670,

Motif  1..33



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Virion

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB13356.cif

Structure  SPKB13356.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3850.77414

Aliphatic index  94.54545455

Isoelectric point  10.7513089

Charge (pH=7)   5.932830274

Topological polar surface area  1441.54

Aromaticity  0.090909091

Average rotatable bonds  3.96969697

Number of hydrogen bond donors  53

Number of hydrogen bond acceptors  55

X logP energy  -10.00083

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.