SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB13327

Signal sequence   MSSSTLLHLLLLSSLLFSCLANVEDEFSYIEGNPNGPENWGNLKPEWETCGKGMEQSPIQLRDNRVIFDQTLGRLRRNYRAVDARLRNSGHDVLVEFKGNAGSLSINRVAYQLKRIHFHSPSEHEMNGERFDLEAQLVHESQDQKRAVVSILFIFGRADPFLSDLEDFIKQFSSSQKNEINAGVVDPNQLQIDDSAYYRYMGSFTAPPCTEGISWTVMRKVATVSPRQVLLLKQAVNENAINNARPLQPTNFRSVFYFEQLKSKVCAI

Length  100

Organism  Dioscorea polystachya (Chinese yam)

UniProt ID  Q75N34,

Motif  1..NA



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB13327.cif

Structure  SPKB13327.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  30460.46004

Aliphatic index  85.1119403

Isoelectric point  6.787605449

Charge (pH=7)   -1.675961391

Topological polar surface area  12777.97

Aromaticity  0.093283582

Average rotatable bonds  3.731343284

Number of hydrogen bond donors  440

Number of hydrogen bond acceptors  418

X logP energy  -206.67314

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.