SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB13325

Signal sequence   MDIVPVVALCCCLVLLPSWAYG

Length  22

Organism  Oryza sativa subsp. japonica (Rice)

UniProt ID  Q75J39,

Motif  1..22



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB13325.cif

Structure  SPKB13325.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2365.95054

Aliphatic index  150.4545455

Isoelectric point  3.749939235

Charge (pH=7)   -1.188343778

Topological polar surface area  750.39

Aromaticity  0.090909091

Average rotatable bonds  3.090909091

Number of hydrogen bond donors  28

Number of hydrogen bond acceptors  30

X logP energy  -1.201

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.