SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB13300

Signal sequence   MRVKEKYQHLRRWGWRWGTMLLGMLMICSATE

Length  32

Organism  Human immunodeficiency virus type 1 group M subtype B (isolate LW123) (HIV-1)

UniProt ID  Q70626,

Motif  1..32



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Virion

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB13300.cif

Structure  SPKB13300.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3968.79354

Aliphatic index  73.125

Isoelectric point  10.85961271

Charge (pH=7)   4.029015193

Topological polar surface area  1539.72

Aromaticity  0.125

Average rotatable bonds  4.15625

Number of hydrogen bond donors  59

Number of hydrogen bond acceptors  52

X logP energy  -8.68392

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.