SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB13210

Signal sequence   MRPGLPSYLIILAVCLFSHLLSS

Length  23

Organism  Human cytomegalovirus (strain Merlin) (HHV-5) (Human herpesvirus 5)

UniProt ID  Q6SW67,

Motif  1..23



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Virion

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  5VOB,

Predicted Structure ID  SPKB13210.cif

Structure  SPKB13210.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2531.11254

Aliphatic index  152.6086957

Isoelectric point  8.534796248

Charge (pH=7)   1.026064949

Topological polar surface area  877.67

Aromaticity  0.086956522

Average rotatable bonds  3.391304348

Number of hydrogen bond donors  32

Number of hydrogen bond acceptors  33

X logP energy  -4.17543

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.