SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB13146

Signal sequence   MASRPSVRHPSHNHPLRGHKAQVEDEIICSGCDLDLLGAYFKCTKSECDYFLHKSCFDLPREIRHKSHPDHPLILLYSPQNNNSTYTCDACGEYGSGFTYNCSICQYDVHVGCVSVPETMKHDEHVHPLALIYKAPCPKDHIFTCDVCDETMPHNLWLYYCQKCDYGAHLHSCVAEEEEKSKKGGRGRGGEGGSGGNGVNRGRSSANSELAAMLKAQREMEQMQIALHLEMQRAKIDKKSRKHMLKMI

Length  100

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q6NQN8,

Motif  1..NA



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB13146.cif

Structure  SPKB13146.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  27953.76874

Aliphatic index  62.94354839

Isoelectric point  7.365164562

Charge (pH=7)   -0.335524556

Topological polar surface area  11526.07

Aromaticity  0.068548387

Average rotatable bonds  3.754032258

Number of hydrogen bond donors  411

Number of hydrogen bond acceptors  407

X logP energy  -174.89616

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.