SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB13098

Signal sequence   MIKNNKRIKSTVCALSLVALTLGSAVSLA

Length  29

Organism  Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672) (Erwinia carotovora subsp. atroseptica)

UniProt ID  Q6D291,

Motif  1..29



Activity Information


Pathway  NA

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  NA



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB13098.cif

Structure  SPKB13098.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3002.66774

Aliphatic index  137.9310345

Isoelectric point  11.08111025

Charge (pH=7)   3.935121171

Topological polar surface area  1225.64

Aromaticity  0

Average rotatable bonds  3.586206897

Number of hydrogen bond donors  45

Number of hydrogen bond acceptors  44

X logP energy  -13.21083

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.