SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB13045

Signal sequence   MGRAKSMVSLLLVLFLVRA

Length  19

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  Q66GN2,

Motif  1..19



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB13045.cif

Structure  SPKB13045.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2104.68684

Aliphatic index  158.9473684

Isoelectric point  12.51647815

Charge (pH=7)   2.997682643

Topological polar surface area  777.4

Aromaticity  0.052631579

Average rotatable bonds  3.789473684

Number of hydrogen bond donors  29

Number of hydrogen bond acceptors  27

X logP energy  -3.61656

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.