SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB12952

Signal sequence   MAVQACALSLRLGLWMSLLLPVLPGAGARAAGA

Length  33

Organism  Rattus norvegicus (Rat)

UniProt ID  Q63072,

Motif  1..33



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB12952.cif

Structure  SPKB12952.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3279.02634

Aliphatic index  136.3636364

Isoelectric point  10.52640717

Charge (pH=7)   1.936002961

Topological polar surface area  1200.08

Aromaticity  0.03030303

Average rotatable bonds  3.121212121

Number of hydrogen bond donors  43

Number of hydrogen bond acceptors  42

X logP energy  -8.77346

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.